BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C07LP1|AL428874
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1587 1784 0.0
>3x_Contig1587
Length = 10277
Score = 1784 bits (900), Expect = 0.0
Identities = 900/900 (100%)
Strand = Plus / Plus
Query: 1 taagcaggcaaaagaccatatatctgcactggcaccccaagaacagtctagaattacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2613 taagcaggcaaaagaccatatatctgcactggcaccccaagaacagtctagaattacttc 2672
Query: 61 tggtgaacgatactctcttgtttggattgcattggtgtaatgttcgtcgtaccaacatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673 tggtgaacgatactctcttgtttggattgcattggtgtaatgttcgtcgtaccaacatgc 2732
Query: 121 atttcctaaatctgctattttcacctgtattacatcaggccgattctcgttaattgaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2733 atttcctaaatctgctattttcacctgtattacatcaggccgattctcgttaattgaagt 2792
Query: 181 attaaaagcagcttccttcgtggattcatcgccagggactttgttgtccacaatctccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2793 attaaaagcagcttccttcgtggattcatcgccagggactttgttgtccacaatctccat 2852
Query: 241 cgaggaaaatgagtgtgccaattgttcagaagaactattcacgtccttattctccgtact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2853 cgaggaaaatgagtgtgccaattgttcagaagaactattcacgtccttattctccgtact 2912
Query: 301 taacaagttgtgtaagcgtgaaatgcttgcattactattctgaccaacaggagaagtcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2913 taacaagttgtgtaagcgtgaaatgcttgcattactattctgaccaacaggagaagtcag 2972
Query: 361 agtagttgttgctgcactagttgcattagtgttattcgttaaagtttgttctgtaagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2973 agtagttgttgctgcactagttgcattagtgttattcgttaaagtttgttctgtaagaag 3032
Query: 421 tgtattagtagtattacagttattgttttgtaatgtaggctgtcctgatttcccacagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3033 tgtattagtagtattacagttattgttttgtaatgtaggctgtcctgatttcccacagaa 3092
Query: 481 agattgctgtcttgaaatgcttgctgtagtgtttccaaacatatgcgatttcaattcaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3093 agattgctgtcttgaaatgcttgctgtagtgtttccaaacatatgcgatttcaattcaag 3152
Query: 541 aaagcttgacgatgcaaggggggatggtaagggttgtgaacccgtgacaattgtggcccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3153 aaagcttgacgatgcaaggggggatggtaagggttgtgaacccgtgacaattgtggcccg 3212
Query: 601 cctaggtctacgagatctgatcgtagtggatgacgaactagctgatatagatggattatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3213 cctaggtctacgagatctgatcgtagtggatgacgaactagctgatatagatggattatc 3272
Query: 661 aaaagcagtgttgaatgaattatgtctcgaaatattctccaaatgtgctctcgaagccct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3273 aaaagcagtgttgaatgaattatgtctcgaaatattctccaaatgtgctctcgaagccct 3332
Query: 721 cctttgaagctttctttgttctcttttcacttgatccatttcttctactattctcactat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3333 cctttgaagctttctttgttctcttttcacttgatccatttcttctactattctcactat 3392
Query: 781 ggcttccacatcgccaatttccattaaaacattttctggttttatgtcagtgtgaattac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3393 ggcttccacatcgccaatttccattaaaacattttctggttttatgtcagtgtgaattac 3452
Query: 841 accacacttcctatgcatataatcaagacctaacaatagctgctttgctatttgcttgac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3453 accacacttcctatgcatataatcaagacctaacaatagctgctttgctatttgcttgac 3512
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6571
Number of Sequences: 1807
Number of extensions: 6571
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)